I am receiving a NullPointerException when running
rma2info -r2c but not when doing
rma2info -c2c after
malt-run. Here is the error trace, I am running with a synonyms file. I discovered that 1 taxon in my reference was not present in
taxonomy.tre, and after adding it to those files, I still receive the error. Thank you for your help! Let me know if there is any additional info that would be useful.
java.lang.NullPointerException at megan/megan.tools.RMA2Info.isDescendant(RMA2Info.java:455) at megan/megan.tools.RMA2Info.reportRead2Count(RMA2Info.java:387) at megan/megan.tools.RMA2Info.run(RMA2Info.java:153) at megan/megan.tools.RMA2Info.main(RMA2Info.java:63)