Hey Daniel
I have run rma2info on other samples, so I know that the script works. But this sample (error given below) is a few Gb in size. Maybe that’s why I am getting the following error?
script-
/home/j/jigyasa-arora/local/megan/tools/rma2info --in nr-matches-filename-301-68.fasta.daa.rma --read2class GTDB --paths --out meganoutput-301-68.txt
Version MEGAN Community Edition (version 6.21.1, built 21 Feb 2021)
Author(s) Daniel H. Huson
Copyright © 2020 Daniel H. Huson. This program comes with ABSOLUTELY NO WARRANTY.
Caught:
java.io.IOException: endFooterSection mismatch
at megan/megan.rma6.FooterSectionRMA6.read(FooterSectionRMA6.java:74)
at megan/megan.rma6.RMA6File.load(RMA6File.java:79)
at megan/megan.rma6.RMA6File.(RMA6File.java:63)
at megan/megan.rma6.RMA6Connector.getAuxiliaryData(RMA6Connector.java:215)
at megan/megan.core.SyncArchiveAndDataTable.syncArchive2Summary(SyncArchiveAndDataTable.java:80)
at megan/megan.core.Document.reloadFromConnector(Document.java:256)
at megan/megan.core.Document.loadMeganFile(Document.java:236)
at megan/megan.tools.RMA2Info.run(RMA2Info.java:122)
at megan/megan.tools.RMA2Info.main(RMA2Info.java:62)