Hey Daniel,
I just wanted to report what I think is a bug in the gc-assembler tool in megan 6.7.12. I previously worked with 6.7.9 and it worked fine to assemble my reads in a meganized daa file, but in 6.7.12 i get the following error while parsing the file (I upload a log file of the failed run)
SRR3987482.gc-assembly.log (4.3 KB)
Dear Max,
thanks for the bug report. I have fixed the problem, please update to 6.7.14. I tested the fix on a couple of cases, seems to work as intended. Please let me know if you run into any more problems
Daniel