Hi all,
I’m trying to maganize one of my diamond daa file yet it was always killed during writing phase. I tried to enlarge the memory invoked however it didn’t work. Here is the verbose:
Version MEGAN Ultimate Edition (version 6.24.20, built 5 Feb 2023)
Author(s) Daniel H. Huson
Copyright (C) 2023 Daniel H. Huson. This program comes with ABSOLUTELY NO WARRANTY.
Java version: 18.0.2.1
Functional classifications to use: EC, EGGNOG, GTDB, INTERPRO2GO, KEGG, SEED
Loading ncbi.map: 2,396,736
Loading ncbi.tre: 2,396,740
Loading ec.map: 8,200
Loading ec.tre: 8,204
Loading eggnog.map: 30,875
Loading eggnog.tre: 30,986
Loading gtdb.map: 240,103
Loading gtdb.tre: 240,107
Loading interpro2go.map: 14,242
Loading interpro2go.tre: 28,907
Loading kegg.map: 25,480
Loading kegg.tre: 68,226
Loading seed.map: 961
Loading seed.tre: 962
Meganizing: ~/Documents/daa_origin/sample10.daa
Meganizing init
Annotating DAA file using FAST mode (accession database and first accession per line)
Annotating references
10% 20% 30% 40% 50% 60% 70% 80% 90% 100% (149.8s)
Writing
10% 20% 30% 40% 50% 60% 70% 80% 90% ~/megan/tools/daa-meganizer: line 38: 581947 Killed $java $java_flags --module-path=$modulepath --add-modules=megan6u megan6u.tools.DAAMeganizer $options
Anyone can guide me how to fix it? Many thanks!