48.73 964315 964315 U 0 unclassified 51.27 1014537 202 - 1 root 51.26 1014335 0 - 131567 cellular organisms 51.21 1013319 3 D 2 Bacteria 17.89 354049 0 - 1783270 FCB group 17.89 354049 0 - 68336 Bacteroidetes/Chlorobi group 17.89 354049 15 P 976 Bacteroidetes 17.89 354034 0 C 200643 Bacteroidia 17.89 354034 814 O 171549 Bacteroidales 17.55 347207 0 F 815 Bacteroidaceae 17.55 347207 1795 G 816 Bacteroides 17.45 345404 270369 S 817 Bacteroides fragilis 2.03 40230 40230 - 862962 Bacteroides fragilis 638R 1.76 34805 34805 - 295405 Bacteroides fragilis YCH46 0.00 8 8 S 28116 Bacteroides ovatus 0.14 2837 0 F 171550 Rikenellaceae 0.14 2837 0 G 239759 Alistipes 0.14 2837 2837 S 2585118 Alistipes communis 0.11 2107 0 F 171552 Prevotellaceae 0.11 2107 0 G 838 Prevotella 0.05 964 964 S 1177574 Prevotella jejuni 0.03 671 0 S 589436 Prevotella fusca 0.03 671 671 - 1236517 Prevotella fusca JCM 17724 0.02 472 472 S 76123 Prevotella enoeca 0.04 830 0 F 2005525 Tannerellaceae 0.04 830 0 G 375288 Parabacteroides 0.04 830 0 S 823 Parabacteroides distasonis 0.04 830 830 - 435591 Parabacteroides distasonis ATCC 8503 0.01 237 0 - 333046 Bacteroidales incertae sedis 0.01 237 13 G 909656 Phocaeicola 0.01 224 0 S 376805 Phocaeicola salanitronis 0.01 224 224 - 667015 Phocaeicola salanitronis DSM 18170 0.00 2 0 F 2005519 Barnesiellaceae 0.00 2 0 G 1348911 Coprobacter 0.00 2 0 - 2677116 unclassified Coprobacter 0.00 2 2 S 2751153 Coprobacter sp. 2CBH44 16.06 317706 5 P 1224 Proteobacteria 16.05 317701 5 C 1236 Gammaproteobacteria 16.05 317696 19 O 91347 Enterobacterales 16.05 317676 37328 F 543 Enterobacteriaceae 14.13 279677 617 G 561 Escherichia 14.10 279041 223983 S 562 Escherichia coli 2.26 44673 44673 - 481805 Escherichia coli ATCC 8739 0.14 2833 2833 - 566546 Escherichia coli W 0.13 2491 538 - 83333 Escherichia coli K-12 0.09 1737 1737 - 879462 Escherichia coli str. K-12 substr. MG1655star 0.01 211 211 - 511145 Escherichia coli str. K-12 substr. MG1655 0.00 4 4 - 316407 Escherichia coli str. K-12 substr. W3110 0.00 1 1 - 1403831 Escherichia coli str. K-12 substr. MC4100 0.11 2249 2249 - 595495 Escherichia coli KO11FL 0.04 721 721 - 2603836 Escherichia coli O10:H32 0.02 343 343 - 2773706 Escherichia coli O68:H12 0.02 333 333 - 1050617 Escherichia coli UMNF18 0.01 206 206 - 331112 Escherichia coli HS 0.01 181 181 - 1358422 Escherichia coli PCN061 0.01 162 162 - 2778653 Escherichia coli O112ab:H8 0.01 150 150 - 941323 Escherichia coli VR50 0.00 73 73 - 340186 Escherichia coli E110019 0.00 69 69 - 696406 Escherichia coli UMNK88 0.00 53 53 - 585055 Escherichia coli 55989 0.00 52 52 - 1446746 Escherichia coli O6:H16 0.00 51 51 - 2605619 Escherichia coli O16:H48 0.00 49 49 - 2773707 Escherichia coli O19:H7 0.00 48 48 - 2773705 Escherichia coli O18ac:H14 0.00 37 37 - 1441627 Escherichia coli str. Sanji 0.00 37 37 - 2697517 Escherichia coli O84:H7 0.00 30 30 - 745156 Escherichia coli 1303 0.00 19 19 - 913091 Escherichia coli TW10598 0.00 18 18 - 498388 Escherichia coli C 0.00 18 18 - 2605620 Escherichia coli O80:H26 0.00 16 16 - 1200752 Escherichia coli NCCP15648 0.00 16 16 - 2048780 Escherichia coli O25:H16 0.00 13 13 - 2491679 Escherichia coli O22:H8 0.00 11 11 - 866789 Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 0.00 10 10 - 2048778 Escherichia coli O178:H19 0.00 9 9 - 2778657 Escherichia coli O9:H10 0.00 8 0 - 168927 Escherichia coli O111:H- 0.00 8 8 - 585396 Escherichia coli O111:H- str. 11128 0.00 8 8 - 2778652 Escherichia coli O100:H21 0.00 7 7 - 930406 Escherichia coli O157:H16 0.00 5 5 - 1435461 Escherichia coli KLY 0.00 5 5 - 2027293 Escherichia coli O8:H8 0.00 5 5 - 2048776 Escherichia coli O128:H27 0.00 5 5 - 2773704 Escherichia coli O15:H12 0.00 4 4 - 1412834 Escherichia coli FAP1 0.00 3 3 - 37762 Escherichia coli B 0.00 3 1 - 83334 Escherichia coli O157:H7 0.00 1 1 - 155864 Escherichia coli O157:H7 str. EDL933 0.00 1 1 - 1328859 Escherichia coli O157:H7 str. SS17 0.00 3 0 - 861906 Escherichia coli O44:H18 0.00 3 3 - 216592 Escherichia coli 042 0.00 3 3 - 1055538 Escherichia coli O145 0.00 3 3 - 1446701 Escherichia coli O169:H41 0.00 3 3 - 1446707 Escherichia coli O25:NM 0.00 3 3 - 2778654 Escherichia coli O152:H23 0.00 2 2 - 585397 Escherichia coli ED1a 0.00 2 2 - 991915 Escherichia coli O121:H19 0.00 2 0 - 1038927 Escherichia coli O104:H4 0.00 2 2 - 1048254 Escherichia coli O104:H4 str. C227-11 0.00 2 2 - 1078034 Escherichia coli O145:H28 0.00 1 1 - 376725 Escherichia coli O103:H2 0.00 1 1 - 405955 Escherichia coli APEC O1 0.00 1 1 - 941322 Escherichia coli O25b:H4-ST131 0.00 1 1 - 1045010 Escherichia coli O157 0.00 1 0 - 1055536 Escherichia coli O103 0.00 1 1 - 1055540 Escherichia coli O103 str. RM8385 0.00 1 1 - 1382700 Escherichia coli PMV-1 0.00 1 1 - 1392854 Escherichia coli M8 0.00 1 0 - 1603259 Escherichia coli O139:H28 0.00 1 1 - 331111 Escherichia coli O139:H28 str. E24377A 0.00 1 1 - 1954351 Escherichia coli APEC O2-211 0.00 1 0 - 2233553 Escherichia coli O43 0.00 1 1 - 1055541 Escherichia coli O43 str. RM10042 0.00 1 1 - 2778656 Escherichia coli O20:H12 0.00 19 19 S 564 Escherichia fergusonii 0.02 353 0 G 590 Salmonella 0.02 333 218 S 28901 Salmonella enterica 0.01 115 44 - 59201 Salmonella enterica subsp. enterica 0.00 55 55 - 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 14 3 - 119912 Salmonella enterica subsp. enterica serovar Choleraesuis 0.00 11 11 - 938142 Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 0.00 1 1 - 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 1 1 - 28150 Salmonella enterica subsp. enterica serovar Senftenberg 0.00 20 0 - 2614656 unclassified Salmonella 0.00 13 13 S 2686305 Salmonella sp. S13 0.00 7 7 S 2664291 Salmonella sp. HNK130 0.01 192 0 G 570 Klebsiella 0.01 107 93 S 573 Klebsiella pneumoniae 0.00 14 14 - 72407 Klebsiella pneumoniae subsp. pneumoniae 0.00 85 85 S 571 Klebsiella oxytoca 0.00 81 0 G 620 Shigella 0.00 71 70 S 621 Shigella boydii 0.00 1 1 - 300268 Shigella boydii Sb227 0.00 6 6 S 624 Shigella sonnei 0.00 3 3 S 623 Shigella flexneri 0.00 1 1 S 622 Shigella dysenteriae 0.00 27 27 G 83654 Leclercia 0.00 12 0 G 547 Enterobacter 0.00 10 0 S 354276 Enterobacter cloacae complex 0.00 8 8 S 158836 Enterobacter hormaechei 0.00 1 1 S 208224 Enterobacter kobei 0.00 1 1 S 1812935 Enterobacter roggenkampii 0.00 2 0 - 2608935 unclassified Enterobacter 0.00 2 2 S 2742639 Enterobacter sp. RHBSTW-00175 0.00 5 0 G 544 Citrobacter 0.00 3 3 S 35703 Citrobacter amalonaticus 0.00 2 1 - 2644389 unclassified Citrobacter 0.00 1 1 S 2742641 Citrobacter sp. RHBSTW-00229 0.00 1 0 G 579 Kluyvera 0.00 1 1 S 61648 Kluyvera intermedia 0.00 1 0 F 1903411 Yersiniaceae 0.00 1 0 G 629 Yersinia 0.00 1 0 S 1649845 Yersinia pseudotuberculosis complex 0.00 1 1 S 633 Yersinia pseudotuberculosis 12.57 248752 690 - 1783272 Terrabacteria group 10.59 209569 438 P 1239 Firmicutes 8.05 159250 0 C 186801 Clostridia 8.05 159250 249 O 186802 Clostridiales 3.98 78713 12 F 186803 Lachnospiraceae 3.93 77748 5 G 841 Roseburia 3.88 76761 76761 S 301301 Roseburia hominis 0.05 982 0 S 166486 Roseburia intestinalis 0.05 982 982 - 536231 Roseburia intestinalis L1-82 0.02 490 0 G 2719313 Enterocloster 0.02 490 490 S 1531 Enterocloster clostridioformis 0.01 246 0 G 2316020 Mediterraneibacter 0.01 246 0 S 33038 [Ruminococcus] gnavus 0.01 246 246 - 411470 [Ruminococcus] gnavus ATCC 29149 0.01 204 0 G 572511 Blautia 0.01 118 0 S 1322 Blautia hansenii 0.01 118 118 - 537007 Blautia hansenii DSM 20583 0.00 86 0 - 2648079 unclassified Blautia 0.00 86 86 S 2479767 Blautia sp. SC05B48 0.00 12 0 G 207244 Anaerostipes 0.00 12 12 S 649756 Anaerostipes hadrus 0.00 1 0 G 1506553 Lachnoclostridium 0.00 1 0 - 2608895 unclassified Lachnoclostridium 0.00 1 1 S 1834196 Lachnoclostridium sp. YL32 2.60 51450 0 F 186804 Peptostreptococcaceae 2.60 51450 0 G 1870884 Clostridioides 2.60 51450 48626 S 1496 Clostridioides difficile 0.06 1097 1097 - 499176 Clostridioides difficile CIP 107932 0.03 610 610 - 479834 Clostridioides difficile QCD-37x79 0.02 354 354 - 479833 Clostridioides difficile QCD-97b34 0.01 226 226 - 645462 Clostridioides difficile CD196 0.01 222 222 - 699033 Clostridioides difficile 2007855 0.01 126 126 - 479832 Clostridioides difficile QCD-76w55 0.00 77 77 - 455631 Clostridioides difficile QCD-66c26 0.00 77 77 - 699034 Clostridioides difficile BI1 0.00 33 33 - 479831 Clostridioides difficile QCD-63q42 0.00 2 2 - 699036 Clostridioides difficile CF5 1.32 26150 0 F 541000 Ruminococcaceae 1.30 25671 0 G 216851 Faecalibacterium 1.30 25671 25313 S 853 Faecalibacterium prausnitzii 0.02 358 358 - 411483 Faecalibacterium prausnitzii A2-165 0.02 479 0 G 946234 Flavonifractor 0.02 479 479 S 292800 Flavonifractor plautii 0.12 2443 0 F 216572 Oscillospiraceae 0.11 2084 0 G 459786 Oscillibacter 0.11 2084 0 - 2629304 unclassified Oscillibacter 0.11 2084 2084 S 2109687 Oscillibacter sp. PEA192 0.02 359 0 G 2591381 Dysosmobacter 0.02 359 359 S 2093857 Dysosmobacter welbionis 0.01 242 0 F 186806 Eubacteriaceae 0.01 242 0 G 1730 Eubacterium 0.01 156 0 - 2624479 unclassified Eubacterium 0.01 156 156 S 2764325 Eubacterium sp. NSJ-61 0.00 86 86 S 2041044 Eubacterium maltosivorans 0.00 3 0 F 31979 Clostridiaceae 0.00 3 0 G 1485 Clostridium 0.00 3 3 S 1491 Clostridium botulinum 1.33 26267 0 C 909932 Negativicutes 1.33 26267 0 O 1843489 Veillonellales 1.33 26267 0 F 31977 Veillonellaceae 1.33 26267 754 G 29465 Veillonella 0.56 11003 11003 S 2682456 Veillonella nakazawae 0.45 8984 8984 S 39778 Veillonella dispar 0.28 5526 5526 S 29466 Veillonella parvula 1.14 22611 0 C 91061 Bacilli 1.14 22601 53 O 186826 Lactobacillales 1.14 22532 0 F 33958 Lactobacillaceae 1.14 22532 0 G 2742598 Limosilactobacillus 1.14 22532 22529 S 1613 Limosilactobacillus fermentum 0.00 1 1 - 334390 Lactobacillus fermentum IFO 3956 0.00 1 1 - 767453 Lactobacillus fermentum F-6 0.00 1 1 - 1381124 Lactobacillus fermentum 3872 0.00 15 0 F 81852 Enterococcaceae 0.00 15 0 G 1350 Enterococcus 0.00 15 15 S 1351 Enterococcus faecalis 0.00 1 0 F 1300 Streptococcaceae 0.00 1 0 G 1357 Lactococcus 0.00 1 1 S 1363 Lactococcus garvieae 0.00 10 0 O 1385 Bacillales 0.00 9 0 F 186817 Bacillaceae 0.00 9 0 G 1386 Bacillus 0.00 9 0 S 86661 Bacillus cereus group 0.00 7 0 S 1396 Bacillus cereus 0.00 7 7 - 526969 Bacillus cereus m1550 0.00 2 2 S 1405 Bacillus mycoides 0.00 1 0 F 90964 Staphylococcaceae 0.00 1 0 G 1279 Staphylococcus 0.00 1 1 S 1282 Staphylococcus epidermidis 0.05 1003 0 C 526524 Erysipelotrichia 0.05 1003 0 O 526525 Erysipelotrichales 0.05 1003 51 F 128827 Erysipelotrichaceae 0.04 841 0 G 2678885 Faecalibacillus 0.04 841 841 S 1982626 Faecalibacillus intestinalis 0.01 110 0 G 2749267 Amedibacterium 0.01 110 110 S 2583452 Amedibacterium intestinale 0.00 1 0 G 1573534 Faecalitalea 0.00 1 0 S 39483 Faecalitalea cylindroides 0.00 1 1 - 717960 Faecalitalea cylindroides T2-87 1.95 38492 0 P 201174 Actinobacteria 1.95 38492 0 C 1760 Actinomycetia 1.93 38269 0 O 85004 Bifidobacteriales 1.93 38269 0 F 31953 Bifidobacteriaceae 1.93 38269 39 G 1678 Bifidobacterium 1.93 38225 357 S 1680 Bifidobacterium adolescentis 1.91 37868 37868 - 367928 Bifidobacterium adolescentis ATCC 15703 0.00 5 0 S 216816 Bifidobacterium longum 0.00 3 1 - 1679 Bifidobacterium longum subsp. longum 0.00 1 1 - 722911 Bifidobacterium longum subsp. longum F8 0.00 1 1 - 890402 Bifidobacterium longum subsp. longum BBMN68 0.00 2 2 - 205913 Bifidobacterium longum DJO10A 0.01 220 0 O 2037 Actinomycetales 0.01 220 0 F 2049 Actinomycetaceae 0.01 220 0 G 1654 Actinomyces 0.01 220 220 S 544580 Actinomyces oris 0.00 3 0 O 85011 Streptomycetales 0.00 3 0 F 2062 Streptomycetaceae 0.00 3 0 G 1883 Streptomyces 0.00 3 0 S 1477431 Streptomyces albidoflavus group 0.00 3 3 S 1902 Streptomyces coelicolor 0.00 1 0 P 544448 Tenericutes 0.00 1 0 C 31969 Mollicutes 0.00 1 0 O 2085 Mycoplasmatales 0.00 1 0 F 2092 Mycoplasmataceae 0.00 1 0 G 2093 Mycoplasma 0.00 1 0 S 656088 Mycoplasma mycoides group 0.00 1 0 S 2102 Mycoplasma mycoides 0.00 1 1 - 40477 Mycoplasma mycoides subsp. capri 2.77 54799 0 P 32066 Fusobacteria 2.77 54799 0 C 203490 Fusobacteriia 2.77 54799 0 O 203491 Fusobacteriales 2.77 54799 0 F 203492 Fusobacteriaceae 2.77 54799 0 G 848 Fusobacterium 2.76 54544 354 S 851 Fusobacterium nucleatum 2.69 53259 22002 - 76859 Fusobacterium nucleatum subsp. animalis 0.58 11468 11468 - 469607 Fusobacterium nucleatum subsp. animalis 4_8 0.54 10589 10589 - 469601 Fusobacterium nucleatum subsp. animalis 21_1A 0.46 9200 9200 - 457405 Fusobacterium nucleatum subsp. animalis 7_1 0.02 480 480 - 76857 Fusobacterium nucleatum subsp. polymorphum 0.01 229 119 - 76856 Fusobacterium nucleatum subsp. nucleatum 0.01 110 110 - 525283 Fusobacterium nucleatum subsp. nucleatum ATCC 23726 0.01 222 8 - 155615 Fusobacterium nucleatum subsp. vincentii 0.01 202 202 - 469602 Fusobacterium nucleatum subsp. vincentii 3_1_27 0.00 12 12 - 1307427 Fusobacterium nucleatum subsp. vincentii ChDC F8 0.01 255 0 - 2648384 unclassified Fusobacterium 0.01 255 255 S 671211 Fusobacterium sp. oral taxon 203 1.92 38010 0 - 1783257 PVC group 1.92 38010 0 P 74201 Verrucomicrobia 1.92 38010 0 C 203494 Verrucomicrobiae 1.92 38010 0 O 48461 Verrucomicrobiales 1.92 38010 0 F 1647988 Akkermansiaceae 1.92 38010 0 G 239934 Akkermansia 1.92 38010 38010 S 239935 Akkermansia muciniphila 0.05 1016 0 D 2157 Archaea 0.05 1016 0 P 28890 Euryarchaeota 0.05 1016 0 - 2283794 Methanomada group 0.05 1016 0 C 183925 Methanobacteria 0.05 1016 0 O 2158 Methanobacteriales 0.05 1016 0 F 2159 Methanobacteriaceae 0.05 1016 0 G 2172 Methanobrevibacter 0.05 1016 3 S 2173 Methanobrevibacter smithii 0.05 1013 1013 - 420247 Methanobrevibacter smithii ATCC 35061