#mpa_v30_CHOCOPhlAn_201901 #/home/dportik/.conda/envs/mpa/bin/metaphlan STD.sam --nproc 12 --input_type sam --nreads 1978852 -o STD-profiled_metagenome.txt --index mpa_v30_CHOCOPhlAn_201901 --bowtie2db /dept/appslab/datasets/dp_metaphlan #SampleID Metaphlan_Analysis #clade_name NCBI_tax_id relative_abundance additional_species k__Bacteria 2 99.70225 k__Eukaryota 2759 0.21428 k__Archaea 2157 0.08347 k__Bacteria|p__Firmicutes 2|1239 39.83772 k__Bacteria|p__Proteobacteria 2|1224 27.76134 k__Bacteria|p__Bacteroidetes 2|976 20.19486 k__Bacteria|p__Fusobacteria 2|32066 6.92886 k__Bacteria|p__Actinobacteria 2|201174 2.86286 k__Bacteria|p__Verrucomicrobia 2|74201 2.09383 k__Eukaryota|p__Ascomycota 2759|4890 0.21428 k__Archaea|p__Euryarchaeota 2157|28890 0.08347 k__Bacteria|p__Planctomycetes 2|203682 0.01992 k__Bacteria|p__Chloroflexi 2|200795 0.00285 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria 2|1224|1236 27.76134 k__Bacteria|p__Firmicutes|c__Clostridia 2|1239|186801 23.12792 k__Bacteria|p__Bacteroidetes|c__Bacteroidia 2|976|200643 20.19486 k__Bacteria|p__Firmicutes|c__Negativicutes 2|1239|909932 15.01707 k__Bacteria|p__Fusobacteria|c__Fusobacteriia 2|32066|203490 6.92886 k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae 2|74201|203494 2.09383 k__Bacteria|p__Actinobacteria|c__Actinobacteria 2|201174|1760 1.99896 k__Bacteria|p__Firmicutes|c__Bacilli 2|1239|91061 1.65755 k__Bacteria|p__Actinobacteria|c__Coriobacteriia 2|201174|84998 0.8639 k__Eukaryota|p__Ascomycota|c__Saccharomycetes 2759|4890|4891 0.21428 k__Archaea|p__Euryarchaeota|c__Methanobacteria 2157|28890|183925 0.08347 k__Bacteria|p__Firmicutes|c__Limnochordia 2|1239|1676648 0.03519 k__Bacteria|p__Planctomycetes|c__Planctomycetia 2|203682|203683 0.01992 k__Bacteria|p__Chloroflexi|c__Chloroflexia 2|200795|32061 0.00285 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales 2|1224|1236|91347 27.65473 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales 2|1239|186801|186802 23.12792 k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales 2|976|200643|171549 20.19486 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales 2|1239|909932|1843489 15.01707 k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales 2|32066|203490|203491 6.92886 k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales 2|74201|203494|48461 2.09383 k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales 2|201174|1760|85004 1.99896 k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales 2|1239|91061|186826 1.65275 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales 2|201174|84998|84999 0.83863 k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales 2759|4890|4891|4892 0.21428 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales 2|1224|1236|135624 0.09126 k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales 2157|28890|183925|2158 0.08347 k__Bacteria|p__Firmicutes|c__Limnochordia|o__Limnochordales 2|1239|1676648|1676649 0.03519 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Eggerthellales 2|201174|84998|1643822 0.02527 k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales 2|203682|203683|112 0.01992 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Chromatiales 2|1224|1236|135613 0.01535 k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales 2|1239|91061|1385 0.0048 k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Chloroflexales 2|200795|32061|32064 0.00285 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae 2|1224|1236|91347|543 27.61469 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae 2|1239|186801|186802|541000 15.20619 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales|f__Veillonellaceae 2|1239|909932|1843489|31977 15.01707 k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae 2|976|200643|171549|815 11.74941 k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae 2|976|200643|171549|171552 8.44545 k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae 2|32066|203490|203491|203492 6.92886 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae 2|1239|186801|186802|186803 5.23336 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae 2|1239|186801|186802|186804 2.68837 k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales|f__Akkermansiaceae 2|74201|203494|48461|1647988 2.09383 k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae 2|201174|1760|85004|31953 1.99896 k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae 2|1239|91061|186826|33958 1.58778 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales|f__Coriobacteriaceae 2|201174|84998|84999|84107 0.74676 k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae 2759|4890|4891|4892|4893 0.12458 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales|f__Atopobiaceae 2|201174|84998|84999|1643824 0.09187 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Succinivibrionaceae 2|1224|1236|135624|83763 0.09126 k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae 2759|4890|4891|4892|766764 0.0897 k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae 2157|28890|183925|2158|2159 0.08347 k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae 2|1239|91061|186826|186828 0.06496 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Erwiniaceae 2|1224|1236|91347|1903409 0.04004 k__Bacteria|p__Firmicutes|c__Limnochordia|o__Limnochordales|f__Limnochordaceae 2|1239|1676648|1676649|1676650 0.03519 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Eggerthellales|f__Eggerthellaceae 2|201174|84998|1643822|1643826 0.02527 k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Isosphaeraceae 2|203682|203683|112|1763524 0.01795 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Chromatiales|f__Ectothiorhodospiraceae 2|1224|1236|135613|72276 0.01535 k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae 2|1239|91061|1385|186817 0.0048 k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Chloroflexales|f__Roseiflexaceae 2|200795|32061|32064|1508635 0.00285 k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Gemmataceae 2|203682|203683|112|1914233 0.00197 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia 2|1224|1236|91347|543|561 27.11878 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium 2|1239|186801|186802|541000|216851 15.20619 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales|f__Veillonellaceae|g__Veillonella 2|1239|909932|1843489|31977|29465 15.01707 k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides 2|976|200643|171549|815|816 11.74941 k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella 2|976|200643|171549|171552|838 8.44545 k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium 2|32066|203490|203491|203492|848 6.92886 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Roseburia 2|1239|186801|186802|186803|841 5.23336 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Clostridioides 2|1239|186801|186802|186804|1870884 2.68837 k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales|f__Akkermansiaceae|g__Akkermansia 2|74201|203494|48461|1647988|239934 2.09383 k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium 2|201174|1760|85004|31953|1678 1.78399 k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus 2|1239|91061|186826|33958|1578 1.58778 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella 2|201174|84998|84999|84107|102106 0.66786 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Klebsiella 2|1224|1236|91347|543|570 0.27615 k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Aeriscardovia 2|201174|1760|85004|31953|240233 0.21496 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Franconibacter 2|1224|1236|91347|543|1649295 0.14726 k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Saccharomyces 2759|4890|4891|4892|4893|4930 0.12458 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales|f__Atopobiaceae|g__Olsenella 2|201174|84998|84999|1643824|133925 0.09187 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Succinivibrionaceae|g__Anaerobiospirillum 2|1224|1236|135624|83763|13334 0.09126 k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Candida 2759|4890|4891|4892|766764|1535326 0.0897 k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter 2157|28890|183925|2158|2159|2172 0.08347 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales|f__Coriobacteriaceae|g__Enorma 2|201174|84998|84999|84107|1472762 0.0789 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Superficieibacter 2|1224|1236|91347|543|2303321 0.06617 k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Agitococcus 2|1239|91061|186826|186828|186829 0.06496 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Erwiniaceae|g__Erwinia 2|1224|1236|91347|1903409|551 0.04004 k__Bacteria|p__Firmicutes|c__Limnochordia|o__Limnochordales|f__Limnochordaceae|g__Limnochorda 2|1239|1676648|1676649|1676650|1676651 0.03519 k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Isosphaeraceae|g__Paludisphaera 2|203682|203683|112|1763524|1763521 0.01795 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Chromatiales|f__Ectothiorhodospiraceae|g__Alkalilimnicola 2|1224|1236|135613|72276|133193 0.01535 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Eggerthellales|f__Eggerthellaceae|g__Slackia 2|201174|84998|1643822|1643826|84108 0.01351 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Eggerthellales|f__Eggerthellaceae|g__Denitrobacterium 2|201174|84998|1643822|1643826|79603 0.01176 k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Hydrogenibacillus 2|1239|91061|1385|186817|1609627 0.0048 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Citrobacter 2|1224|1236|91347|543|544 0.00401 k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Chloroflexales|f__Roseiflexaceae|g__Kouleothrix 2|200795|32061|32064|1508635|186475 0.00285 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Salmonella 2|1224|1236|91347|543|590 0.00232 k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Gemmataceae|g__Gemmata 2|203682|203683|112|1914233|113 0.00197 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_coli 2|1224|1236|91347|543|561|562 27.11878 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_sp_EC_NT1,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC1139,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC2175,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC2531,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC1567,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC1708,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC2710,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_flexneri,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC1882,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_dysenteriae,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_sp_4726_5,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sonnei,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC1544,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_PAMC_28760,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC3196,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_sp_MOD1_EC6475,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC2541,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC2125,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC1764,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_SF_2015,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_sp_4_1_40B,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC2833,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC1661,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_sp_KTE172,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_sp_KTE114,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC2117,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_sp_KTE31,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC1180,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC2928,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC1737,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_sp_R8,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC1172,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_sp_1_1_43,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_boydii,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC569,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC2045,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC1056,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sp_FC2383 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii 2|1239|186801|186802|541000|216851|853 15.20619 k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_sp k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_fragilis 2|976|200643|171549|815|816|817 11.74941 k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_3_2_5,k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_fragilis_CAG_47 k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_corporis 2|976|200643|171549|171552|838|28128 8.44545 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales|f__Veillonellaceae|g__Veillonella|s__Veillonella_dispar 2|1239|909932|1843489|31977|29465|39778 7.00205 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_T14073_2 k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_nucleatum 2|32066|203490|203491|203492|848|851 6.75112 k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_CM21,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_HMSC064B11,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_HMSC065F01,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_CM1,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_CM22,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_CAG_649,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_HMSC064B12,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_oral_taxon_203,k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_OBRC1 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k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_sp_HMSC24D01 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales|f__Veillonellaceae|g__Veillonella|s__Veillonella_infantium 2|1239|909932|1843489|31977|29465|1911679 1.40683 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_aerofaciens 2|201174|84998|84999|84107|102106|74426 0.32788 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_pneumoniae 2|1224|1236|91347|543|570|573 0.27615 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_sp_GL120222_02,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_sp_4_1_44FAA,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_sp_AA405,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_sp_MS_92_3,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_sp_HMSC16A12,k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_sp_S1 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_intestinalis 2|201174|84998|84999|84107|102106|147207 0.25125 k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Aeriscardovia|s__Aeriscardovia_aeriphila 2|201174|1760|85004|31953|240233|218139 0.21496 k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_oral_taxon_370 2|32066|203490|203491|203492|848|712288 0.17775 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Franconibacter|s__Franconibacter_helveticus 2|1224|1236|91347|543|1649295|357240 0.14726 k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Saccharomyces|s__Saccharomyces_cerevisiae 2759|4890|4891|4892|4893|4930|4932 0.11827 k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Saccharomyces|s__Saccharomyces_sp_boulardii k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_T11011_6 2|1239|909932|1843489|31977|29465|2027459 0.10219 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales|f__Atopobiaceae|g__Olsenella|s__Olsenella_scatoligenes 2|201174|84998|84999|1643824|133925|1299998 0.09187 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Succinivibrionaceae|g__Anaerobiospirillum|s__Anaerobiospirillum_thomasii 2|1224|1236|135624|83763|13334|179995 0.09126 k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Candida|s__Candida_albicans 2759|4890|4891|4892|766764|1535326|5476 0.0897 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_stercoris 2|201174|84998|84999|84107|102106|147206 0.08872 k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii 2157|28890|183925|2158|2159|2172|2173 0.08347 k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii_CAG_186,k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_sp_A54 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales|f__Coriobacteriaceae|g__Enorma|s__[Collinsella]_massiliensis 2|201174|84998|84999|84107|1472762|1232426 0.06677 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Superficieibacter|s__Superficieibacter_electus 2|1224|1236|91347|543|2303321|2022662 0.06617 k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Agitococcus|s__Agitococcus_lubricus 2|1239|91061|186826|186828|186829|1077255 0.06496 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales|f__Veillonellaceae|g__Veillonella|s__Veillonella_atypica 2|1239|909932|1843489|31977|29465|39777 0.05023 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_HPA0037,k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_T34266_5,k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_ACP1,k__Bacteria|p__Firmicutes|c__Negativicutes|o__Veillonellales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_ICM51a k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Erwiniaceae|g__Erwinia|s__Erwinia_persicina 2|1224|1236|91347|1903409|551|55211 0.04004 k__Bacteria|p__Firmicutes|c__Limnochordia|o__Limnochordales|f__Limnochordaceae|g__Limnochorda|s__Limnochorda_pilosa 2|1239|1676648|1676649|1676650|1676651|1555112 0.03519 k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_catenulatum 2|201174|1760|85004|31953|1678|1686 0.02441 k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Isosphaeraceae|g__Paludisphaera|s__Paludisphaera_borealis 2|203682|203683|112|1763524|1763521|1387353 0.01795 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Chromatiales|f__Ectothiorhodospiraceae|g__Alkalilimnicola|s__Alkalilimnicola_ehrlichii 2|1224|1236|135613|72276|133193|351052 0.01535 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Eggerthellales|f__Eggerthellaceae|g__Slackia|s__Slackia_isoflavoniconvertens 2|201174|84998|1643822|1643826|84108|572010 0.01351 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Coriobacteriales|f__Coriobacteriaceae|g__Enorma|s__Enorma_massiliensis 2|201174|84998|84999|84107|1472762|1472761 0.01213 k__Bacteria|p__Actinobacteria|c__Coriobacteriia|o__Eggerthellales|f__Eggerthellaceae|g__Denitrobacterium|s__Denitrobacterium_detoxificans 2|201174|84998|1643822|1643826|79603|79604 0.01176 k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Hydrogenibacillus|s__Hydrogenibacillus_schlegelii 2|1239|91061|1385|186817|1609627|1484 0.0048 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Citrobacter|s__Citrobacter_pasteurii 2|1224|1236|91347|543|544|1563222 0.00401 k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Saccharomyces|s__Saccharomyces_cerevisiae_x_Saccharomyces_kudriavzevii 2759|4890|4891|4892|4893|4930|332112 0.00316 k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Saccharomyces|s__Saccharomyces_kudriavzevii 2759|4890|4891|4892|4893|4930|114524 0.00314 k__Bacteria|p__Chloroflexi|c__Chloroflexia|o__Chloroflexales|f__Roseiflexaceae|g__Kouleothrix|s__Kouleothrix_aurantiaca 2|200795|32061|32064|1508635|186475|186479 0.00285 k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_pseudocatenulatum 2|201174|1760|85004|31953|1678|28026 0.00282 k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Salmonella|s__Salmonella_enterica 2|1224|1236|91347|543|590|28901 0.00232 k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Gemmataceae|g__Gemmata|s__Gemmata_obscuriglobus 2|203682|203683|112|1914233|113|114 0.00197